PlanTAP Family TR022

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main family mTERF
sub family
accession number TR022
category TR
citation(s) Fernandez-Silva et al. (1997)
number of members 85
number of non-redundant members 48
number of members in trees 48
number of queries 5
number of clusters 3
consensus domain(s) IPR003690
last modified 2006-08-02 16:31:40.590638
 

3 contributing PlanTAP Family Cluster(s) with phylogenetic tree(s):
TR022_82TR022_229TR022_392
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member species taxonomic profile

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in family clusters
is a? in tree? redundant?
graphical view of the family members' domain structures
 

85 members shown

member_name length description species is a in #clusters in tree redundant representative repr. species domains
AAC79107 541 Arabidopsis thaliana query 1 n y Q9ZT96_ARATH Arabidopsis thaliana HMMPfam:PF02536, HMMSmart:SM00733
AAL85111 507 Arabidopsis thaliana query 1 n y O80572_ARATH Arabidopsis thaliana HMMPfam:PF02536, HMMSmart:SM00733
AAT69165 283 Arabidopsis thaliana query 1 n y O80618_ARATH Arabidopsis thaliana HMMPfam:PF02536, HMMSmart:SM00733
At1g74120.1 445 68408.m07881 hypothetical protein Arabidopsis thaliana hit 1 n y Q9C6A1_ARATH Arabidopsis thaliana HMMPfam:PF02536, HMMPanther:PTHR13068, HMMSmart:SM00733
At2g03050.1 284 68409.m00224 hypothetical protein Arabidopsis thaliana hit 2 n y O80618_ARATH Arabidopsis thaliana HMMPfam:PF02536, HMMPanther:PTHR13068, HMMSmart:SM00733
At2g21710.1 673 68409.m02337 hypothetical protein Arabidopsis thaliana hit 1 n y Q9SJ27_ARATH Arabidopsis thaliana BlastProDom:PD003461, HMMPfam:PF02536, HMMSmart:SM00733
At2g34620.1 303 68409.m03843 expressed protein Arabidopsis thaliana hit 1 n y O64685_ARATH Arabidopsis thaliana HMMPfam:PF02536, HMMPanther:PTHR13068, HMMSmart:SM00733
At2g36000.1 333 68409.m03998 expressed protein Arabidopsis thaliana hit 2 n y Q9SJ50_ARATH Arabidopsis thaliana HMMPfam:PF02536, HMMSmart:SM00733
At2g36000.2 318 68409.m03999 expressed protein Arabidopsis thaliana hit 2 n y Q9SJ50_ARATH Arabidopsis thaliana HMMPfam:PF02536, HMMSmart:SM00733
At2g44020.1 507 68409.m04946 expressed protein Arabidopsis thaliana hit 2 n y O80572_ARATH Arabidopsis thaliana HMMPfam:PF02536, HMMPanther:PTHR13068:SF7, HMMPanther:PTHR13068, HMMSmart:SM00733
At3g18870.1 274 68410.m02164 hypothetical protein Arabidopsis thaliana hit 3 n y Q9LHN2_ARATH Arabidopsis thaliana HMMPfam:PF02536, HMMPanther:PTHR13068, HMMSmart:SM00733
At3g60400.1 558 68410.m06243 expressed protein various predicted proteins, Arabidopsis thaliana Arabidopsis thaliana hit 1 n y Q9M219_ARATH Arabidopsis thaliana HMMPfam:PF02536, HMMSmart:SM00733
At4g02990.1 541 68411.m00368 expressed protein similar to A. thaliana hypothetical protein F6E13.15, GenBank accession number Arabidopsis thaliana hit 2 n y Q9ZT96_ARATH Arabidopsis thaliana HMMPfam:PF02536, HMMPanther:PTHR13068, HMMSmart:SM00733
At4g14605.1 444 68411.m02035 expressed protein Arabidopsis thaliana hit 1 y n HMMPfam:PF02536, superfamily:SSF46785, HMMPanther:PTHR13068, HMMSmart:SM00733
At4g38160.1 333 68411.m04904 expressed protein Arabidopsis thaliana hit 1 n y Q3E7M9_ARATH Arabidopsis thaliana HMMPfam:PF02536, HMMPanther:PTHR13068, HMMSmart:SM00733
At5g64950.1 391 68412.m07389 expressed protein similar to unknown protein (emb|CAB62602.1) Arabidopsis thaliana hit 1 n y Q8LER1_ARATH Arabidopsis thaliana HMMPfam:PF02536, HMMSmart:SM00733
O04578_ARATH 827 F19K23.6 protein Arabidopsis thaliana hit 1 y n HMMPfam:PF02536, HMMSmart:SM00733
O64685_ARATH 303 Hypothetical protein At2g34620 Arabidopsis thaliana hit 1 y n HMMPfam:PF02536, HMMSmart:SM00733
O80572_ARATH 507 Expressed protein (Hypothetical protein At2g44020) Arabidopsis thaliana hit 2 y n HMMPfam:PF02536, HMMSmart:SM00733
O80618_ARATH 284 Predicted by genefinder and genscan Arabidopsis thaliana hit 2 y n HMMPfam:PF02536, HMMSmart:SM00733
Q3E7M9_ARATH 363 Protein At4g38160 Arabidopsis thaliana hit 1 y n HMMPfam:PF02536, HMMSmart:SM00733
Q84WH2_ARATH 240 Hypothetical protein At2g34620 (Fragment) Arabidopsis thaliana hit 1 n y O64685_ARATH Arabidopsis thaliana HMMPfam:PF02536, HMMSmart:SM00733
Q84X50_ARATH 429 Hypothetical protein At2g21710/F2G1.2 Arabidopsis thaliana hit 1 y n HMMPfam:PF02536, BlastProDom:PD003461, HMMSmart:SM00733
Q84X53_ARATH 283 Hypothetical protein At2g03050/T17M13.22 Arabidopsis thaliana hit 2 n y O80618_ARATH Arabidopsis thaliana HMMPfam:PF02536, HMMSmart:SM00733
Q8LER1_ARATH 391 Hypothetical protein Arabidopsis thaliana hit 1 y n HMMPfam:PF02536, HMMSmart:SM00733
Q8LF84_ARATH 320 Hypothetical protein Arabidopsis thaliana hit 3 y n Q9SJ50_ARATH Arabidopsis thaliana HMMPfam:PF02536, HMMSmart:SM00733
Q8S8E4_ARATH 318 Expressed protein Arabidopsis thaliana hit 2 n y Q9SJ50_ARATH Arabidopsis thaliana HMMPfam:PF02536, HMMSmart:SM00733
Q93WJ2_ARATH 158 AT4g02990/T4I9_13 Arabidopsis thaliana hit 2 n y Q9ZT96_ARATH Arabidopsis thaliana HMMPfam:PF02536
Q9C6A1_ARATH 445 Hypothetical protein F9E11.3 Arabidopsis thaliana hit 1 y n HMMPfam:PF02536
Q9LHN2_ARATH 274 Gb|AAC26693.1 Arabidopsis thaliana hit 3 y n HMMPfam:PF02536, HMMSmart:SM00733
Q9LV83_ARATH 391 Emb|CAB62602.1 Arabidopsis thaliana hit 1 n y Q8LER1_ARATH Arabidopsis thaliana HMMPfam:PF02536, HMMSmart:SM00733
Q9M219_ARATH 558 Hypothetical protein T8B10_60 Arabidopsis thaliana hit 1 y n HMMPfam:PF02536
Q9SJ27_ARATH 673 Hypothetical protein At2g21710 Arabidopsis thaliana hit 1 y n BlastProDom:PD003461, HMMPfam:PF02536, HMMSmart:SM00733
Q9SJ50_ARATH 333 At2g36000/F11F19.9 Arabidopsis thaliana hit 2 y n HMMPfam:PF02536, HMMSmart:SM00733
Q9SZL6_ARATH 333 Hypothetical protein F20D10.280 (Hypothetical protein AT4g38160) (AT4g38160/F20D10_280) Arabidopsis thaliana hit 1 n y Q3E7M9_ARATH Arabidopsis thaliana HMMPfam:PF02536, superfamily:SSF47794, HMMSmart:SM00733
Q9ZT96_ARATH 541 Hypothetical protein T4I9.13 (Hypothetical protein AT4g02990) Arabidopsis thaliana hit 2 y n HMMPfam:PF02536, HMMSmart:SM00733
Q2L8W8_BRANA 302 MTERF-like protein Brassica napus hit 1 y n HMMPfam:PF02536, HMMSmart:SM00733
cr155303 332 Chlamydomonas reinhardtii hit 1 y n HMMPfam:PF02536, HMMPanther:PTHR13068, HMMSmart:SM00733
cr170139 251 Chlamydomonas reinhardtii hit 1 y n HMMPanther:PTHR13068, HMMPfam:PF02536, HMMSmart:SM00733
Q8LJS6_CHLRE 373 MOC1 Chlamydomonas reinhardtii hit 1 y n HMMPfam:PF02536
CMT470C_1 589 hypothetical protein, conserved Cyanidioschyzon merolae hit 1 y n HMMPfam:PF02536, HMMPanther:PTHR13068, HMMSmart:SM00733
Q653Q9_ORYSA 651 Hypothetical protein OJ1065_E04.23 Oryza sativa hit 1 y n HMMPfam:PF02536, HMMSmart:SM00733
Q67UH0_ORYSA 393 Mitochondrial transcription termination factor-like Oryza sativa hit 1 y n HMMPfam:PF02536
Q67UH7_ORYSA 389 Mitochondrial transcription termination factor-like Oryza sativa hit 1 y n HMMPfam:PF02536
Q69JG0_ORYSA 416 Hypothetical protein P0229B10.10 (Hypothetical protein P0569E11.32) Oryza sativa hit 2 y n HMMPfam:PF02536
Q69JV5_ORYSA 282 Mitochondrial transcription termination factor-like protein Oryza sativa hit 2 y n HMMPfam:PF02536
Q6AUK6_ORYSA 508 Hypothetical protein OSJNBb0006J12.15 Oryza sativa hit 2 y n HMMPfam:PF02536, HMMSmart:SM00733
Q6K5F5_ORYSA 271 Mitochondrial transcription termination factor-like protein Oryza sativa hit 2 y n HMMPfam:PF02536, superfamily:SSF46929, HMMSmart:SM00733
Q6K7E2_ORYSA 485 Mitochondrial transcription termination factor-like Oryza sativa hit 2 y n HMMPfam:PF02536, HMMSmart:SM00733
Q6Z8L0_ORYSA 399 Mitochondrial transcription termination factor-like Oryza sativa hit 1 y n HMMPfam:PF02536
Q6ZDY9_ORYSA 608 Hypothetical protein P0507H12.26 Oryza sativa hit 2 y n HMMPfam:PF02536
Q84Z62_ORYSA 333 Hypothetical protein P0686C03.126 Oryza sativa hit 1 y n HMMPfam:PF02536, HMMSmart:SM00733
Q84ZT1_ORYSA 503 Hypothetical protein OJ1127_E01.105 Oryza sativa hit 1 y n HMMPfam:PF02536, HMMSmart:SM00733
Q9FVZ8_ORYSA 218 Hypothetical protein OSJNBb0073N24.3 Oryza sativa hit 2 y n superfamily:SSF48726
2338.m00146 521 |||mTERF, putative|o_sativa|chr_4|OSJNBa0046C22|2338 Oryza sativa japonica cultivar-group hit 2 y n HMMPfam:PF02536, HMMPanther:PTHR13068, HMMSmart:SM00733
2497.m00105 399 |||mTERF, putative|o_sativa|chr_2|OJ1308_A10|2497 Oryza sativa japonica cultivar-group hit 1 n y Q6Z8L0_ORYSA Oryza sativa HMMPfam:PF02536, superfamily:SSF53067, HMMPanther:PTHR13068, HMMSmart:SM00733
3659.m00172 301 |||mTERF|o_sativa|chr_3|OSJNBa0048D11|3659 Oryza sativa japonica cultivar-group hit 1 y n HMMPfam:PF02536, HMMSmart:SM00733
3699.m00147 454 |||mTERF, putative|o_sativa|chr_2|OJ1669_F01|3699 Oryza sativa japonica cultivar-group hit 2 n y Q6K5F5_ORYSA Oryza sativa HMMPfam:PF02536, HMMPanther:PTHR13068, HMMSmart:SM00733
3717.m00136 393 |||hypothetical protein|o_sativa|chr_6|P0690H04|3717 Oryza sativa japonica cultivar-group hit 1 n y Q67UH0_ORYSA Oryza sativa HMMPfam:PF02536, HMMSmart:SM00733
3846.m00188 399 |||hypothetical protein|o_sativa|chr_2|P0431B06|3846 Oryza sativa japonica cultivar-group hit 1 n y Q6Z8L0_ORYSA Oryza sativa HMMPfam:PF02536, superfamily:SSF53067, HMMPanther:PTHR13068, HMMSmart:SM00733
4248.m00144 574 |||AC004005 expressed protein|o_sativa|chr_2|OJ1311_D08|4248 Oryza sativa japonica cultivar-group hit 2 y n HMMPfam:PF02536, HMMPanther:PTHR13068:SF7, HMMPanther:PTHR13068, HMMSmart:SM00733
43.m00074 218 ||OSJNBb0073N24.3|hypothetical protein|o_sativa|chr_10|OSJNBb0073N24|43 Oryza sativa japonica cultivar-group hit 2 n y Q9FVZ8_ORYSA Oryza sativa superfamily:SSF48726
4405.m00129 651 |||Z97336 from A. thaliana. This gene is probably cut off.|o_sativa|chr_9|OJ1065_E04|4405 Oryza sativa japonica cultivar-group hit 1 n y Q653Q9_ORYSA Oryza sativa HMMPfam:PF02536, HMMPanther:PTHR13068, HMMSmart:SM00733
4867.m00155 333 |||mTERF|o_sativa|chr_8|OJ1047_H11|4867 Oryza sativa japonica cultivar-group hit 1 n y Q84Z62_ORYSA Oryza sativa HMMPfam:PF02536, HMMPanther:PTHR13068, HMMSmart:SM00733
4978.m00208 454 |||mTERF, putative|o_sativa|chr_2|OJ1791_B03|4978 Oryza sativa japonica cultivar-group hit 2 n y Q6K5F5_ORYSA Oryza sativa HMMPfam:PF02536, HMMPanther:PTHR13068, HMMSmart:SM00733
5117.m00179 434 |||mTERF, putative|o_sativa|chr_5|OSJNBb0006J12|5117 Oryza sativa japonica cultivar-group hit 2 n y Q6AUK6_ORYSA Oryza sativa HMMPfam:PF02536, HMMPanther:PTHR13068, HMMSmart:SM00733
5506.m00154 393 |||expressed protein|o_sativa|chr_6|P0638H11|5506 Oryza sativa japonica cultivar-group hit 1 n y Q67UH0_ORYSA Oryza sativa HMMPfam:PF02536, HMMSmart:SM00733
5506.m00159 875 |||expressed protein|o_sativa|chr_6|P0638H11|5506 Oryza sativa japonica cultivar-group hit 1 n y Q67UH7_ORYSA Oryza sativa HMMPfam:PF02536, HMMSmart:SM00733
6186.m00152 368 |||hypothetical protein|o_sativa|chr_5|P0530H10|6186 Oryza sativa japonica cultivar-group hit 2 y n
6393.m00174 368 |||hypothetical protein|o_sativa|chr_5|P0692D12|6393 Oryza sativa japonica cultivar-group hit 2 n y 6186.m00152 Oryza sativa japonica cultivar-group
6602.m00177 282 |||hypothetical protein|o_sativa|chr_2|B1342F01|6602 Oryza sativa japonica cultivar-group hit 2 n y Q69JV5_ORYSA Oryza sativa HMMPfam:PF02536, HMMSmart:SM00733
7019.m00123 498 |||mTERF, putative|o_sativa|chr_7|OJ1127_E01|7019 Oryza sativa japonica cultivar-group hit 1 y n HMMPfam:PF02536, HMMPanther:PTHR13068, HMMSmart:SM00733
7044.m00163 333 |||mTERF|o_sativa|chr_8|P0686C03|7044 Oryza sativa japonica cultivar-group hit 1 n y Q84Z62_ORYSA Oryza sativa HMMPfam:PF02536, HMMPanther:PTHR13068, HMMSmart:SM00733
7089.m00083 608 |||mTERF, putative|o_sativa|chr_7|P0507H12|7089 Oryza sativa japonica cultivar-group hit 2 n y Q6ZDY9_ORYSA Oryza sativa HMMPfam:PF02536, HMMPanther:PTHR13068, HMMSmart:SM00733
8113.m00092 310 ||OSJNBb0024J17.3|expressed protein|o_sativa|chr_3|OSJNBb0024J17|8113 Oryza sativa japonica cultivar-group hit 2 y n HMMPfam:PF02536, HMMPanther:PTHR13068, HMMSmart:SM00733
BAC56785 333 Oryza sativa japonica cultivar-group query 1 n y Q84Z62_ORYSA Oryza sativa HMMPfam:PF02536, HMMSmart:SM00733
PP020043294R 181 FrameD:1:546:1 pp(03/04):SIN:PP020043294R:***: Q6K7E2 Mitochondrial transcription termination factor-like Physcomitrella patens hit 1 y n HMMPfam:PF02536, HMMPanther:PTHR13068, HMMSmart:SM00733
PP030013067R 228 FrameD:1:689:3 pp(03/04):CSI:PP030013067R:**: PP_CL_6203.Singlet Homolog of 68417.m00406 mitochondrial transcription termination factor family protein / mTERF family protein weak similarity to mtDBP protein [Paracentrotus lividus] GI:4584695; contains Pfam profile PF02536: mTERF Physcomitrella patens hit 2 y n HMMPfam:PF02536, HMMSmart:SM00733
PP_10964_C1 186 FrameD:72:632:3 pp(03/04):CON:PP_10964_C1: not annotated Physcomitrella patens Physcomitrella patens hit 1 y n
PP_6557_C1 280 FrameD:55:897:1 [Translation of PP_6557_C1 pp(03/04):CON:PP_6557_C1:***: O80618 Predicted by genefinder and genscan. [corrected by FrameD] Physcomitrella patens hit 3 y n HMMPfam:PF02536, HMMSmart:SM00733
Q5NRP5_SOLDE 318 Putative mTERF domain containing protein Solanum demissum hit 3 y n HMMPfam:PF02536, HMMSmart:SM00733
Q60D34_SOLDE 318 Putative mTERF domain containing protein Solanum demissum hit 3 y n HMMPfam:PF02536, HMMSmart:SM00733
tp110894 389 Thalassiosira pseudonana hit 1 y n HMMPfam:PF02536, HMMSmart:SM00733
tp134790 191 Thalassiosira pseudonana hit 1 y n HMMPfam:PF02536, HMMSmart:SM00733
Q4UI36_THEAN 701 Hypothetical protein Theileria annulata hit 1 y n HMMPfam:PF02536

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