PlanTAP Family PT021

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main family TPR domain containing
sub family
accession number PT021
category putative TAP
citation(s) D'Andrea and Regan (2003), Goebl and Yanagida (1991)
number of members 36
number of non-redundant members 32
number of members in trees 32
number of queries 1
number of clusters 1
consensus domain(s) IPR001440, IPR011990, IPR013026, IPR013105
last modified 2006-08-02 16:31:40.590638
 

1 contributing PlanTAP Family Cluster(s) with phylogenetic tree(s):
PT021_234
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member species taxonomic profile

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in family clusters
is a? in tree? redundant?
graphical view of the family members' domain structures
 

36 members shown

member_name length description species is a in #clusters in tree redundant representative repr. species domains
At1g17680.1 896 68408.m09117 transcription factor - related low similarity to SP|P33339 Transcription factor tau 131 kDa subunit (TFIIIC 131 kDa subunit) Saccharomyces cerevisiae, transcription factor IIIC102 short isoform [Homo sapiens] GI:18481637 Arabidopsis thaliana hit 1 n y Q8GUP0_ARATH Arabidopsis thaliana superfamily:SSF48452, HMMPanther:PTHR23082, superfamily:SSF48439, HMMPfam:PF00515, Gene3D:G3D.1.25.40.10, HMMSmart:SM00028, HMMPfam:PF07719, ProfileScan:PS50293
At1g17680.2 896 68408.m09118 transcription factor - related low similarity to SP|P33339 Transcription factor tau 131 kDa subunit (TFIIIC 131 kDa subunit) Saccharomyces cerevisiae, transcription factor IIIC102 short isoform [Homo sapiens] GI:18481637 Arabidopsis thaliana hit 1 n y Q8GUP0_ARATH Arabidopsis thaliana superfamily:SSF48452, HMMPanther:PTHR23082, superfamily:SSF48439, HMMPfam:PF00515, Gene3D:G3D.1.25.40.10, HMMSmart:SM00028, HMMPfam:PF07719, ProfileScan:PS50293
Q56YL8_ARATH 394 Hypothetical protein At1g17680 Arabidopsis thaliana hit 1 y n Gene3D:G3D.1.25.40.10, superfamily:SSF48439, ProfileScan:PS50293
Q8GUP0_ARATH 896 Hypothetical protein At1g17680 Arabidopsis thaliana hit 1 y n HMMPfam:PF00515, superfamily:SSF48439, Gene3D:G3D.1.25.40.10, HMMPfam:PF07719, HMMSmart:SM00028, ProfileScan:PS50293
Q9FZ65_ARATH 815 F11A6.2 protein Arabidopsis thaliana hit 1 y n superfamily:SSF48439, Gene3D:G3D.1.25.40.10, HMMPfam:PF00515, HMMPfam:PF07719, HMMSmart:SM00028, ProfileScan:PS50293
Q4WJS3_ASPFU 1095 RNA polymerase III transcription factor TFIIIC subunit (Tfc4), putative Aspergillus fumigatus hit 1 y n HMMPfam:PF07719, Gene3D:G3D.1.25.40.10, HMMSmart:SM00028, HMMPfam:PF00515, ProfileScan:PS50293
Q5BGC3_EMENI 1077 Hypothetical protein Aspergillus nidulans FGSC A4 hit 1 y n Gene3D:G3D.1.25.40.10, HMMPfam:PF00515, HMMSmart:SM00028, superfamily:SSF47413, ProfileScan:PS50293, ProfileScan:PS50005
Q2UKE9_ASPOR 1088 RNA polymerase III transcription factor TFIIIC Aspergillus oryzae hit 1 y n HMMPfam:PF07719, Gene3D:G3D.1.25.40.10, HMMPfam:PF00515, HMMSmart:SM00028, ProfileScan:PS50293, ProfileScan:PS50005
Q5BLI4_BRARE 275 LOC553318 protein (Fragment) Brachydanio rerio hit 1 y n Gene3D:G3D.1.25.40.10, ProfileScan:PS50005, ProfileScan:PS50293
Q5AEJ4_CANAL 1057 Hypothetical protein TFC4 Candida albicans SC5314 hit 1 y n HMMTigr:TIGR00756, Gene3D:G3D.1.25.40.10, HMMPfam:PF07719, HMMSmart:SM00028, HMMPfam:PF00515, ProfileScan:PS50005, ProfileScan:PS50293
Q44D73_CHRSL 1415 Sulfotransferase:TPR repeat Chromohalobacter salexigens DSM 3043 hit 1 y n superfamily:SSF48439, Gene3D:G3D.1.25.40.10, ProfileScan:PS50293, HMMPfam:PF07719, HMMSmart:SM00028, HMMPfam:PF00515, ProfileScan:PS50005, HMMPfam:PF00685
Q5KAR1_CRYNE 971 RNA polymerase III transcription factor, putative Cryptococcus neoformans hit 1 n y Q55KR3_CRYNE Cryptococcus neoformans var. Gene3D:G3D.1.25.40.10, ProfileScan:PS50293, HMMPfam:PF00515, HMMSmart:SM00028, ProfileScan:PS50005
Q55KR3_CRYNE 1004 Hypothetical protein Cryptococcus neoformans var. hit 1 y n ProfileScan:PS50293, HMMPfam:PF00515, HMMSmart:SM00028, Gene3D:G3D.1.25.40.10, ProfileScan:PS50005
Q5CGI0_CRYHO 933 Hypothetical protein Cryptosporidium hominis hit 1 y n Gene3D:G3D.1.25.40.10, HMMSmart:SM00028
Q5CRV9_CRYPV 933 Tfc4p like TFIIIC subunit; TPR repeat containing basal transcription factor Cryptosporidium parvum hit 1 y n Gene3D:G3D.1.25.40.10, HMMSmart:SM00028
Q6BJN1_DEBHA 982 Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii Debaryomyces hansenii hit 1 y n HMMPfam:PF00515, HMMSmart:SM00028, HMMTigr:TIGR00756, Gene3D:G3D.1.25.40.10, ProfileScan:PS50005, ProfileScan:PS50293
Q514Y3_ENTHI 200 Transcription factor IIIC102 short isoform Entamoeba histolytica HM-1:IMSS hit 1 y n Gene3D:G3D.1.25.40.10, ProfileScan:PS50293, HMMPfam:PF00515, HMMSmart:SM00028, ProfileScan:PS50005
Q514Y5_ENTHI 863 TPR repeat protein Entamoeba histolytica HM-1:IMSS hit 1 y n Gene3D:G3D.1.25.40.10, HMMPfam:PF00515, HMMSmart:SM00028, ProfileScan:PS50005, ProfileScan:PS50293
Q4IBN2_GIBZE 934 Hypothetical protein Gibberella zeae hit 1 y n superfamily:SSF48439, HMMPfam:PF07719, Gene3D:G3D.1.25.40.10, ProfileScan:PS50293, HMMSmart:SM00028, HMMPfam:PF00515, ProfileScan:PS50005
Q46CR5_METBA 825 Hypothetical protein Methanosarcina barkeri hit 1 y n Gene3D:G3D.1.25.40.10, superfamily:SSF48439, ProfileScan:PS50293, HMMPfam:PF07719, HMMSmart:SM00028, HMMPfam:PF00515, ProfileScan:PS50005
Q3X9C2_METFL 700 TPR repeat Methylobacillus flagellatus KT hit 1 y n Gene3D:G3D.1.25.40.10, ProfileScan:PS50293, HMMPfam:PF07719, HMMPfam:PF00515, HMMSmart:SM00028, ProfileScan:PS50005
Q7RZQ4_NEUCR 1142 Hypothetical protein Neurospora crassa hit 1 y n Gene3D:G3D.1.25.40.10, superfamily:SSF48439, HMMPfam:PF07719, HMMSmart:SM00028, ProfileScan:PS50293, ProfileScan:PS50005
Q676A0_9UROC 1070 UDP-N-acetylglucosaminyltransferase Oikopleura dioica hit 1 y n ProfileScan:PS50293, superfamily:SSF48439, Gene3D:G3D.1.25.40.10, HMMPfam:PF00515, HMMSmart:SM00028, ProfileScan:PS50005
Q53LZ5_ORYSA 969 TPR Domain, putative Oryza sativa hit 1 y n superfamily:SSF48439, Gene3D:G3D.1.25.40.10, ProfileScan:PS50293, HMMPfam:PF00515, HMMSmart:SM00028, ProfileScan:PS50005
6755.m00122 900 |||TPR Domain, putative|o_sativa|chr_11|OSJNBb0011I07|6755 Oryza sativa japonica cultivar-group both 1 n y Q53LZ5_ORYSA Oryza sativa HMMPanther:PTHR23083, superfamily:SSF48452, Gene3D:G3D.1.25.40.10, ProfileScan:PS50293, ProfileScan:PS50005, HMMPfam:PF00515, HMMSmart:SM00028
PP020006035R 153 FrameD:243:706:-3 pp(03/04):SIN:PP020006035R:**: Homolog of TPR Domain, putative|o_sativa|chr_11|OSJNBb0011I07|6755 Physcomitrella patens hit 1 y n superfamily:SSF48452, Gene3D:G3D.1.25.40.10
Q4X2H0_PLACH 1666 Hypothetical protein (Fragment) Plasmodium chabaudi hit 1 y n Gene3D:G3D.1.25.40.10, HMMPfam:PF07719, HMMPfam:PF00515, HMMSmart:SM00028, ProfileScan:PS50293
Q6LFG7_PLAF7 2017 Hypothetical protein Plasmodium falciparum hit 1 y n Gene3D:G3D.1.25.40.10
Q7RGF8_PLAYO 949 Hypothetical protein Plasmodium yoelii yoelii hit 1 y n Gene3D:G3D.1.25.40.10, HMMPfam:PF07719, ProfileScan:PS50293
Q5BXG0_SCHJA 208 SJCHGC03664 protein (Fragment) Schistosoma japonicum hit 1 y n Gene3D:G3D.1.25.40.10
O74458_SCHPO 1006 Sfc4 protein (Spcc16c4.14c protein) Schizosaccharomyces pombe hit 1 y n Gene3D:G3D.1.25.40.10, HMMPfam:PF07719, ProfileScan:PS50005, ProfileScan:PS50293, HMMSmart:SM00028, HMMPfam:PF00515, superfamily:SSF48439
Q4S335_TETNG 727 Chromosome 3 SCAF14756, whole genome shotgun sequence. (Fragment) Tetraodon nigroviridis hit 1 y n superfamily:SSF48439, Gene3D:G3D.1.25.40.10, HMMSmart:SM00028, HMMPfam:PF00515, ProfileScan:PS50005, ProfileScan:PS50293
Q4U9Y4_THEAN 882 Transcription factor, putative Theileria annulata hit 1 y n ProfileScan:PS50293, Gene3D:G3D.1.25.40.10, HMMPfam:PF00515, HMMSmart:SM00028, ProfileScan:PS50005
Q4N2M5_THEPA 882 Hypothetical protein Theileria parva hit 1 y n ProfileScan:PS50293, Gene3D:G3D.1.25.40.10, HMMPfam:PF00515, HMMSmart:SM00028, ProfileScan:PS50005
Q4PHT1_USTMA 1284 Hypothetical protein Ustilago maydis 521 hit 1 y n ProfileScan:PS50293, Gene3D:G3D.1.25.40.10, HMMPfam:PF00515, ProfileScan:PS50005
Q6CG65_YARLI 926 Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Yarrowia lipolytica hit 1 y n HMMPfam:PF00515, Gene3D:G3D.1.25.40.10, HMMPfam:PF07719, HMMSmart:SM00028, ProfileScan:PS50005, ProfileScan:PS50293

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