PlanTAP Family TR053

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main family YEATS
sub family
accession number TR053
category TR
citation(s) Harborth et al. (2000), Zeisig et al. (2005), Zhang et al. (2004)
number of members 68
number of non-redundant members 55
number of members in trees 55
number of queries 2
number of clusters 1
consensus domain(s) IPR005033
last modified 2006-08-02 16:31:40.590638
 

1 contributing PlanTAP Family Cluster(s) with phylogenetic tree(s):
TR053_176
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member species taxonomic profile

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in family clusters
is a? in tree? redundant?
graphical view of the family members' domain structures
 

68 members shown

member_name length description species is a in #clusters in tree redundant representative repr. species domains
Q7Q1S4_ANOGA 225 ENSANGP00000022234 (Fragment) Anopheles gambiae str. PEST hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
Q6E698_ANTLO 143 Putative transcription initiation factor TFIIF small subunit-like protein Antonospora locustae hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
AAR28019 268 Arabidopsis thaliana query 1 n y Q9FH40_ARATH Arabidopsis thaliana ProfileScan:PS51037, HMMPfam:PF03366
At2g18000.1 202 68409.m01887 hypothetical protein similar to GB:NP_006521and yeast transcription initiation factor TFIIF small subunit Arabidopsis thaliana hit 1 n y Q9SL46_ARATH Arabidopsis thaliana superfamily:SSF55136, HMMPanther:PTHR23195:SF12, HMMPanther:PTHR23195, ProfileScan:PS51037, HMMPfam:PF03366
At5g45600.1 268 68412.m05051 expressed protein contains similarity to unknown protein (gb|AAD20126.1) Arabidopsis thaliana hit 1 n y Q9FH40_ARATH Arabidopsis thaliana HMMPanther:PTHR23195:SF12, HMMPanther:PTHR23195, ProfileScan:PS51037, HMMPfam:PF03366
Q9FH40_ARATH 268 Similarity to unknown protein (TAF14b) (Hypothetical protein At5g45600) Arabidopsis thaliana hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
Q9SL46_ARATH 202 Hypothetical protein At2g18000 (TAF14) Arabidopsis thaliana hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366, superfamily:SSF55136
AF9_ASHGO 208 Protein AF-9 homolog Ashbya gossypii hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
AF9_ASPFU 272 Protein AF-9 homolog Aspergillus fumigatus hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
Q2UJE6_ASPOR 251 Transcription initiation factor IIF Aspergillus oryzae hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
Q32LE1_BOVIN 227 Hypothetical protein Bos taurus hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
Q6DGB4_BRARE 226 YEATS domain containing 4 Brachydanio rerio hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
Q61SK7_CAEBR 211 Hypothetical protein CBG06140 Caenorhabditis briggsae hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
Q21501_CAEEL 211 Hypothetical protein gfl-1 Caenorhabditis elegans hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
AF9_CANAL 254 Protein AF-9 homolog Candida albicans hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366, HMMPanther:PTHR23195:SF10, HMMPanther:PTHR23195
Q3MNY1_CANAL 254 Hypothetical protein CaJ7.0432 Candida albicans hit 1 n y AF9_CANAL Candida albicans ProfileScan:PS51037, HMMPfam:PF03366, HMMPanther:PTHR23195:SF10, HMMPanther:PTHR23195
AF9_CANGA 221 Protein AF-9 homolog Candida glabrata hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
cr155788 206 Chlamydomonas reinhardtii hit 1 y n HMMPanther:PTHR23195:SF12, HMMPanther:PTHR23195, ProfileScan:PS51037, HMMPfam:PF03366
AF9_CRYNE 392 Protein AF-9 homolog Cryptococcus neoformans hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
Q5CI41_CRYHO 478 Gas41 Cryptosporidium hominis hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
Q5CPN0_CRYPV 472 Transcription factor TFIIF Cryptosporidium parvum hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
CMR462C_1 225 hypothetical protein, conserved Cyanidioschyzon merolae hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366, HMMPanther:PTHR23195:SF11, HMMPanther:PTHR23195
Q55AD4_DICDI 717 YEATS family protein Dictyostelium discoideum hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
Q8T1Z4_DICDI 791 Hypothetical protein Dictyostelium discoideum hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
Q7KA77_DROME 737 Hypothetical protein D12 (Fragment) Drosophila melanogaster hit 1 n y Q95R51_DROME Drosophila melanogaster ProfileScan:PS51037, HMMPfam:PF03366
Q8IHH1_DROME 930 AT01735p Drosophila melanogaster hit 1 n y Q9VF92_DROME Drosophila melanogaster ProfileScan:PS51037, HMMPfam:PF03366
Q8MRJ5_DROME 512 LD02329p (Fragment) Drosophila melanogaster hit 1 n y Q9VF92_DROME Drosophila melanogaster ProfileScan:PS51037, HMMPfam:PF03366
Q95R51_DROME 969 SD07884p Drosophila melanogaster hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
Q9VF92_DROME 931 CG4913-PA Drosophila melanogaster hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
Q9VM63_DROME 227 CG9207-PA (LD16161p) Drosophila melanogaster hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
AF9_EMENI 275 Protein AF-9 homolog Emericella nidulans hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
Q8SVZ0_ENCCU 157 Similarity to putative TRANSCRIPTION INITIATION FACTOR TFIIF SMALL SUBUNIT Encephalitozoon cuniculi hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
Q8UVS4_CHICK 227 GAS41 Gallus gallus hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
Q9H8R0_HUMAN 345 CDNA FLJ13308 fis, clone OVARC1001436, weakly similar to ENL PROTEIN Homo sapiens hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
YETS4_HUMAN 227 YEATS domain-containing protein 4 (Glioma-amplified sequence-41) (Gas41) (NuMA binding protein 1) (NuBI-1) (NuBI1) Homo sapiens hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
AF9_KLULA 220 Protein AF-9 homolog Kluyveromyces lactis hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
Q6CRS4_KLULA 256 Similar to sp|P35189 Saccharomyces cerevisiae YPL129w ANC1 TFIIF subunit Kluyveromyces lactis hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
YETS4_MOUSE 227 YEATS domain-containing protein 4 Mus musculus hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
AF9_NEUCR 309 Protein AF-9 homolog Neurospora crassa hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
Q5VPH6_ORYSA 316 Putative TAF14b Oryza sativa hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
1912.m00163 464 |||AY072123 unknown protein|o_sativa|chr_6|P0548D03|1912 Oryza sativa japonica cultivar-group hit 1 y n HMMPanther:PTHR23195:SF12, HMMPanther:PTHR23195, ProfileScan:PS51037, HMMPfam:PF03366
3028.m00196 464 |||AY072123 unknown protein|o_sativa|chr_6|OSJNBa0041F13|3028 Oryza sativa japonica cultivar-group hit 1 n y 1912.m00163 Oryza sativa japonica cultivar-group HMMPanther:PTHR23195:SF12, HMMPanther:PTHR23195, ProfileScan:PS51037, HMMPfam:PF03366
BAD68469 316 Oryza sativa japonica cultivar-group query 1 n y Q5VPH6_ORYSA Oryza sativa ProfileScan:PS51037, HMMPfam:PF03366
BJ162179 89 FrameD:227:493:2 pp(03/04):CSI:BJ162179:**: PP_CL_9314.Singlet Homolog of AY072123 unknown protein|o_sativa|chr_6|OSJNBa0041F13|3028 Physcomitrella patens hit 1 y n HMMPanther:PTHR23195:SF12, HMMPanther:PTHR23195
PP020018263R 159 FrameD:1:482:3 pp(03/04):SIN:PP020018263R:**: Homolog of 68418.m05603 YEATS family protein contains Pfam domain PF03366: YEATS family Physcomitrella patens hit 1 y n HMMPanther:PTHR23195:SF12, HMMPanther:PTHR23195
PP_12365_C2 188 FrameD:1:568:2 pp(03/04):CON:PP_12365_C2:***: Q9FH40 Similarity to unknown protein (TAF14b) (Hypothetical protein At5g45600) Physcomitrella patens hit 1 y n HMMPfam:PF03366, ProfileScan:PS51037, HMMPanther:PTHR23195:SF12, HMMPanther:PTHR23195
PP_9120_C1 134 FrameD:1:404:-3 pp(03/04):CON:PP_9120_C1:**: Homolog of AY072123 unknown protein|o_sativa|chr_6|OSJNBa0041F13|3028 Physcomitrella patens hit 1 n y PP_9120_C2 Physcomitrella patens HMMPanther:PTHR23195:SF12, HMMPanther:PTHR23195, ProfileScan:PS51037, HMMPfam:PF03366
PP_9120_C2 143 FrameD:295:724:1 pp(03/04):CON:PP_9120_C2:**: Homolog of AY072123 unknown protein|o_sativa|chr_6|OSJNBa0041F13|3028 Physcomitrella patens hit 1 y n HMMPanther:PTHR23195:SF12, HMMPanther:PTHR23195
Q4YHX1_PLABE 199 Gas41 homologue, putative Plasmodium berghei hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
Q4Z0G1_PLABE 104 Hypothetical protein (Fragment) Plasmodium berghei hit 1 n y Q4YHX1_PLABE Plasmodium berghei ProfileScan:PS51037, HMMPfam:PF03366
Q4Z6N9_PLABE 126 Hypothetical protein Plasmodium berghei hit 1 n y Q4YHX1_PLABE Plasmodium berghei ProfileScan:PS51037, HMMPfam:PF03366
Q4X9L9_PLACH 90 Hypothetical protein (Fragment) Plasmodium chabaudi hit 1 n y Q4XX86_PLACH Plasmodium chabaudi ProfileScan:PS51037, HMMPfam:PF03366
Q4XX86_PLACH 222 Gas41 homologue, putative Plasmodium chabaudi hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
Q8IAR0_PLAF7 235 Gas41 homologue, putative Plasmodium falciparum hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
Q7R8G8_PLAYO 100 Hypothetical protein Plasmodium yoelii yoelii hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
AF9_YEAST 226 Protein AF-9 homolog Saccharomyces cerevisiae hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
AF9_SCHPO 217 Protein AF-9 homolog Schizosaccharomyces pombe hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
Q4RV90_TETNG 1310 Chromosome 15 SCAF14992, whole genome shotgun sequence Tetraodon nigroviridis hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
Q4SQ68_TETNG 962 Chromosome 19 SCAF14535, whole genome shotgun sequence Tetraodon nigroviridis hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366, ProfileScan:PS50506, HMMSmart:SM00369, FPrintScan:PR00019, HMMPfam:PF00560, HMMSmart:SM00082, ProfileScan:PS50026, HMMPfam:PF00008, superfamily:SSF49265, ProfileScan:PS50853
tp97663 256 Thalassiosira pseudonana hit 1 y n ProfileScan:PS51037, HMMPanther:PTHR23195:SF12, HMMPanther:PTHR23195, HMMPfam:PF03366, Gene3D:G3D.1.20.120.200, superfamily:SSF47266
Q4U8W4_THEAN 229 Hypothetical protein Theileria annulata hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
Q4N1K7_THEPA 241 Gas41, putative Theileria parva hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
Q57ZF8_9TRYP 662 Hypothetical protein Trypanosoma brucei hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
Q4DPB0_TRYCR 461 Hypothetical protein Trypanosoma cruzi hit 1 y n ProfileScan:PS51037
Q6PA89_XENLA 227 MGC68689 protein Xenopus laevis hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
Q6PCJ3_XENLA 1237 MGC68945 protein Xenopus laevis hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
Q6DIK8_XENTR 227 MGC89432 protein Xenopus tropicalis hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366
AF9_YARLI 202 Protein AF-9 homolog Yarrowia lipolytica hit 1 y n ProfileScan:PS51037, HMMPfam:PF03366

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