PlanTAP Family TR041

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main family SWR1
sub family
accession number TR041
category TR
citation(s) Mizuguchi et al. (2004)
number of members 49
number of non-redundant members 39
number of members in trees 39
number of queries 1
number of clusters 1
consensus domain(s) IPR001005, IPR008468, IPR009057, IPR012287
last modified 2006-08-02 16:31:40.590638
 

1 contributing PlanTAP Family Cluster(s) with phylogenetic tree(s):
TR041_404
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member species taxonomic profile

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in family clusters
is a? in tree? redundant?
graphical view of the family members' domain structures
 

49 members shown

member_name length description species is a in #clusters in tree redundant representative repr. species domains
Q7QJA8_ANOGA 445 ENSANGP00000017895 (Fragment) Anopheles gambiae str. PEST hit 1 y n superfamily:SSF46689, HMMPfam:PF05499
At2g47210.1 441 68409.m05324 myb family transcription factor contains Pfam profile: PF00249 myb DNA-binding domain Arabidopsis thaliana hit 1 n y O22895_ARATH Arabidopsis thaliana HMMPanther:PTHR12855:SF5, HMMPanther:PTHR12855, superfamily:SSF46689, Gene3D:G3D.1.10.10.60, HMMSmart:SM00717, HMMPfam:PF00249
O22895_ARATH 486 Hypothetical protein At2g47210 Arabidopsis thaliana hit 1 y n Gene3D:G3D.1.10.10.60, HMMSmart:SM00717, HMMPfam:PF00249, superfamily:SSF46689
Q8VZL6_ARATH 441 Hypothetical protein At2g47210 Arabidopsis thaliana hit 1 n y O22895_ARATH Arabidopsis thaliana Gene3D:G3D.1.10.10.60, HMMSmart:SM00717, HMMPfam:PF00249, superfamily:SSF46689
SWC4_ASHGO 488 SWR1-complex protein 4 Ashbya gossypii hit 1 y n superfamily:SSF46689, Gene3D:G3D.1.10.10.60
SWC4_ASPFU 588 SWR1-complex protein 4 Aspergillus fumigatus hit 1 y n superfamily:SSF46689, ProfileScan:PS50090, Gene3D:G3D.1.10.10.60
Q2UGH9_ASPOR 618 DNA methyltransferase 1-associated protein-1 Aspergillus oryzae hit 1 y n superfamily:SSF46689, Gene3D:G3D.1.10.10.60
Q7ZUN3_BRARE 464 DNA methyltransferase 1 associated protein 1 Brachydanio rerio hit 1 y n superfamily:SSF46689, HMMPfam:PF05499
Q61LU5_CAEBR 477 Hypothetical protein CBG08755 Caenorhabditis briggsae hit 1 y n superfamily:SSF46689, ProfileScan:PS50090, Gene3D:G3D.1.10.10.60, HMMSmart:SM00717, HMMPfam:PF00249, HMMPfam:PF05499
Q8WQA7_CAEEL 486 Hypothetical protein ekl-4 Caenorhabditis elegans hit 1 y n superfamily:SSF46689, HMMPfam:PF05499
SWC4_CANAL 635 SWR1-complex protein 4 Candida albicans hit 1 y n ProfileScan:PS50090, superfamily:SSF46689, Gene3D:G3D.1.10.10.60, HMMSmart:SM00717, HMMPfam:PF00249
SWC4_CANGA 532 SWR1-complex protein 4 Candida glabrata hit 1 y n Gene3D:G3D.1.10.10.60
cr168517 899 Chlamydomonas reinhardtii hit 1 y n
SWC4_CRYNE 463 SWR1-complex protein 4 Cryptococcus neoformans hit 1 y n superfamily:SSF46689
Q5CNQ9_CRYHO 576 Hypothetical protein Cryptosporidium hominis hit 1 y n superfamily:SSF46689, HMMPfam:PF00249
Q5CRX3_CRYPV 576 DNMAP1 like Myb domain containing protein with orthologs in plasmodium Cryptosporidium parvum hit 1 y n superfamily:SSF46689, HMMPfam:PF00249
CMN257C_1 502 similar to DNMT1 associated protein Cyanidioschyzon merolae hit 1 y n superfamily:SSF46689, Gene3D:G3D.1.10.10.60, HMMSmart:SM00717, ProfileScan:PS50090, HMMPfam:PF00249, HMMPanther:PTHR12855
Q54IH7_DICDI 1042 Hypothetical protein Dictyostelium discoideum hit 1 y n superfamily:SSF46689, HMMSmart:SM00717, HMMPfam:PF00249
Q9V961_DROME 433 CG11132-PA (LD35228p) Drosophila melanogaster hit 1 y n superfamily:SSF46689, HMMPfam:PF05499
SWC4_EMENI 586 SWR1-complex protein 4 Emericella nidulans hit 1 y n superfamily:SSF46689, ProfileScan:PS50090, Gene3D:G3D.1.10.10.60
Q51GB9_ENTHI 255 Hypothetical protein Entamoeba histolytica HM-1:IMSS hit 1 y n superfamily:SSF46689, Gene3D:G3D.1.10.10.60
SWC4_GIBZE 570 SWR1-complex protein 4 Gibberella zeae hit 1 y n superfamily:SSF46689, Gene3D:G3D.1.10.10.60
DMAP1_HUMAN 467 DNA methyltransferase 1-associated protein 1 (DNMT1-associated protein 1) (DNMAP1) Homo sapiens hit 1 y n HMMPfam:PF05499
Q5TG36_HUMAN 151 DNA methyltransferase 1 associated protein 1 (Fragment) Homo sapiens hit 1 n y DMAP1_HUMAN Homo sapiens HMMPanther:PTHR12855:SF9, HMMPanther:PTHR12855
Q5TG37_HUMAN 132 DNA methyltransferase 1 associated protein 1 (Fragment) Homo sapiens hit 1 n y DMAP1_HUMAN Homo sapiens superfamily:SSF53271, HMMPanther:PTHR12855:SF9, HMMPanther:PTHR12855
Q5TG38_HUMAN 237 DNA methyltransferase 1 associated protein 1 (Fragment) Homo sapiens hit 1 n y DMAP1_HUMAN Homo sapiens superfamily:SSF46689
Q5TG39_HUMAN 285 DNA methyltransferase 1 associated protein 1 (Fragment) Homo sapiens hit 1 n y DMAP1_HUMAN Homo sapiens superfamily:SSF46689, HMMPfam:PF05499
Q5TG40_HUMAN 302 DNA methyltransferase 1 associated protein 1 (Fragment) Homo sapiens hit 1 n y DMAP1_HUMAN Homo sapiens superfamily:SSF46689, superfamily:SSF47384, HMMPfam:PF05499
SWC4_KLULA 497 SWR1-complex protein 4 Kluyveromyces lactis hit 1 y n superfamily:SSF46689
Q2PFQ0_MACFA 456 Hypothetical protein Macaca fascicularis hit 1 y n superfamily:SSF46689, HMMPfam:PF05499
DMAP1_MOUSE 468 DNA methyltransferase 1-associated protein 1 (DNMT1-associated protein 1) (DNMAP1) (MAT1-mediated transcriptional repressor) Mus musculus hit 1 y n HMMPfam:PF05499
SWC4_NEUCR 771 SWR1-complex protein 4 Neurospora crassa hit 1 y n Gene3D:G3D.1.10.10.60
Q5TKQ2_ORYSA 438 Hypothetical protein OJ1362_G11.6 Oryza sativa hit 1 y n superfamily:SSF46689, Gene3D:G3D.1.10.10.60, HMMSmart:SM00717, HMMPfam:PF00249
7478.m00112 438 |||Myb-like DNA-binding domain, putative|o_sativa|chr_5|OJ1362_G11|7478 Oryza sativa japonica cultivar-group hit 1 n y Q5TKQ2_ORYSA Oryza sativa HMMPanther:PTHR12855:SF5, HMMPanther:PTHR12855, superfamily:SSF46689, Gene3D:G3D.1.10.10.60, HMMSmart:SM00717, HMMPfam:PF00249
AAV67815 438 Oryza sativa japonica cultivar-group query 1 n y Q5TKQ2_ORYSA Oryza sativa superfamily:SSF46689, Gene3D:G3D.1.10.10.60, HMMSmart:SM00717, HMMPfam:PF00249
PP_7269_C1 104 FrameD:1:313:-2 pp(03/04):CON:PP_7269_C1:**: Homolog of Myb-like DNA-binding domain, putative|o_sativa|chr_5|OJ1362_G11|7478 Physcomitrella patens hit 1 n y PP_7269_C2 Physcomitrella patens HMMPanther:PTHR12855:SF5, HMMPanther:PTHR12855
PP_7269_C2 488 FrameD:232:1698:1 pp(03/04):CON:PP_7269_C2:***: Q75KK0 Putative transcription factor (Contains Myb-like DNA-binding domain), PF00249 Physcomitrella patens hit 1 y n HMMPanther:PTHR12855:SF5, HMMPanther:PTHR12855, superfamily:SSF46689, Gene3D:G3D.1.10.10.60, HMMSmart:SM00717, HMMPfam:PF00249
Q7RAY0_PLAYO 321 Hypothetical protein Plasmodium yoelii yoelii hit 1 y n superfamily:SSF46689
Q568Y6_RAT 468 DNA methyltransferase 1-associated protein 1 (Predicted) Rattus norvegicus hit 1 y n superfamily:SSF46689, superfamily:SSF47384, HMMPfam:PF05499
Q5BXN4_SCHJA 279 SJCHGC09578 protein (Fragment) Schistosoma japonicum hit 1 y n superfamily:SSF46689
SWC4_SCHPO 411 SWR1-complex protein 4 Schizosaccharomyces pombe hit 1 y n HMMSmart:SM00717, superfamily:SSF46689
Q4RU94_TETNG 487 Chromosome 1 SCAF14995, whole genome shotgun sequence Tetraodon nigroviridis hit 1 y n superfamily:SSF46689, HMMPfam:PF05499
tp16246 198 Thalassiosira pseudonana hit 1 y n HMMPanther:PTHR12855, superfamily:SSF46689, Gene3D:G3D.1.10.10.60
Q4UJ18_THEAN 357 Hypothetical protein Theileria annulata hit 1 y n superfamily:SSF46689
Q4N6J7_THEPA 611 Hypothetical protein Theileria parva hit 1 y n superfamily:SSF46689
SWC4_USTMA 615 SWR1-complex protein 4 Ustilago maydis hit 1 y n superfamily:SSF46689
Q641D1_XENLA 464 MGC82015 protein Xenopus laevis hit 1 y n superfamily:SSF46689, HMMPfam:PF00249, HMMPfam:PF05499
Q6DK89_XENTR 464 DNA methyltransferase 1 associated protein 1 Xenopus tropicalis hit 1 y n superfamily:SSF46689, HMMPfam:PF00249, HMMPfam:PF05499
SWC4_YARLI 504 SWR1-complex protein 4 Yarrowia lipolytica hit 1 y n superfamily:SSF46689, Gene3D:G3D.1.10.10.60

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